| Publications in which a case was
reported |
Publications that discarded such
a case |
| Wong SC, Abdelal AT. 1990. Unorthodox expression
of an enzyme: evidence for an untranslated region within carA from
Pseudomonas aeruginosa. J Bacteriol 172:630-642.
Abstract. |
Kwon DH, Lu CD, Walthall DA, Brown TM, Houghton JE,
Abdelal AT. 1994. Structure and regulation of the carAB operon in
Pseudomonas aeruginosa and Pseudomonas stutzeri: no untranslated
region exists. J Bacteriol 176:2532-2542. Abstract. Tuohy TM, Kidd T, Gesteland RF, Atkins JF. 1994. Uninterrupted translation through putative 12-nucleotide coding gap in sequence of carA: business as usual. J Bacteriol 176:265-267.Abstract. |
| Benhar I, Engelberg-Kulka H. 1993. Frameshifting
in the expression of the E. coli trpR gene occurs by the bypassing
of a segment of its coding sequence. Cell 72:121-130. Abstract. |
Wills NM, Ingram JA, Gesteland RF, Atkins JF. 1997.
Reported translational bypass in a trpR'-lacZ' fusion is accounted
for by unusual initiation and +1 frameshifting. J Mol Biol 271:491-498.
Abstract. |
| Zheng J, McIntosh MA. 1995. Characterization of IS1221
from Mycoplasma hyorhinis: expression of its putative transposase in
Escherichia coli incorporates a ribosomal frameshift mechanism. Mol Microbiol
16:669-685. Abstract. |
Baranov PV, Gesteland RF, Atkins JF. 2002. Recoding:
translational bifurcations in gene expression. Gene 286:187-201.
Abstract. |
| Makarova KS, Aravind L, Wolf YI, Tatusov RL, Minton
KW, Koonin EV, Daly MJ. 2001. Genome of the extremely radiation-resistant
bacterium Deinococcus radiodurans viewed from the perspective of comparative
genomics. Microbiol Mol Biol Rev 65:44-79. Abstract. Lipton MS, Pasa-Tolic L, Anderson GA, Anderson DJ, Auberry DL, Battista JR, Daly MJ, Fredrickson J, Hixson KK, Kostandarithes H, Masselon C, Markillie LM, Moore RJ, Romine MF, Shen Y, Stritmatter E, Tolic N, Udseth HR, Venkateswaran A, Wong KK, Zhao R, Smith RD. 2002. Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags. Proc Natl Acad Sci U S A 99:11049-11054. Abstract. |
Eggington JM, Haruta N, Wood EA, Cox MM. 2004. The
single-stranded DNA-binding protein of Deinococcus radiodurans. BMC
Microbiol 4:2. Abstract. |
| Cobucci-Ponzano B, Trincone A, Giordano A, Rossi
M, Moracci M. 2003. Identification of an archaeal alpha-L-fucosidase encoded
by an interrupted gene. Production of a functional enzyme by mutations mimicking
programmed -1 frameshifting. J Biol Chem 278:14622-14631. Abstract. |
The case is not discarded. It is not present in the
Recode because the original publication does not provide enough data to consider
this case as a strong candidate for recoding. |
| Ruan X, Zhang C, Peters NK. 1993. Bradyrhizobium
japonicum rhizobitoxine genes and putative enzyme functions: expression
requires a translational frameshift. Proc Natl Acad Sci U S A 90:2641-2645.
Abstract. |
See erratum: 1993.
Proc Natl Acad Sci U S A 90:12055. |
| Choi J, Xu Z, Ou JH. 2003. Triple decoding of hepatitis
C virus RNA by programmed translational frameshifting. Mol Cell Biol 23:1489-1497.
Abstract. Vassilaki N, Mavromara P. 2003. Two alternative translation mechanisms are responsible for the expression of the HCV ARFP/F/core+1 coding open reading frame. J Biol Chem 278:40503-40513. Abstract. |
Ratinier M, Boulant S, Combet C, Targett-Adams P, McLauchlan J, Lavergne JP. 2008. Transcriptional slippage prompts recoding in alternate reading frames in the hepatitis C virus (HCV) core sequence from strain HCV-1. J Gen Virol. 89:1569-78.Abstract. |